R

Workflowr wrapper tools

Some wrapper functions to maybe make your workflowr life more fun (if you don't want to have all your rmarkdown files in the analysis subfolder)

How to code up your own Wright-Fisher model in R to explore genetic drift

Imagine an isolated population. How is genetic variation likely to change over time?

The surprisingly simple way to update Font Awesome icons if you have an old(er) Hugo Wowchemy Academic website

AKA: What I learnt by spending a frustrating 2 days trying to get bluesky icons on my website

How to submit a Slurm job while building a workflowr page

A wrapper function so you can keep the Slurm job inputs and outputs in a workflowr page - and stick to the reproducibility goal of workflowr projects

How to get started with workflowr, git and R projects: a powerful combination to share and save your research code

A basic introduction to git, with tips to easily create a shareable workflowr webpage with a university or institutional gitlab or github account

Make your workflowr project structure more flexible by trying out my code wrapper

Some R functions to make your workflowr life more fun (if you don't want to have all your rmarkdown files in the analysis subfolder)

Predicting the cross population portability of human eQTLs

Masters research project investigating the evolutionary, functional and expression properties of human eQTLs which are non-portable across populations, supervised by: [Dr. Irene Gallego Romero](https://igr-lab.science.unimelb.edu.au/) & [Dr. Christina Azodi](https://azodichr.github.io/) (March 2021 - December 2022)

How much does the unguarded X contribute to sex differences in life span?

Collaboration with Tim Connallon, Yasmine McDonough & Filip Ruzicka (August 2021 - February 2022)

Investigating the evolution of palindromes on the sex chromosomes

A semester long internship developing models to understand the evolutionary dynamics of palindromes on the X chromosome, supervised by: [Dr. Tim Connallon](https://connallonresearch.wordpress.com/) (February 2021 - July 2021)

TABI: Transcriptomic Analyses through Bayesian Inference

Undergraduate research project developing a Bayesian R Package for Differential Gene Expression Analysis over Continuous Covariates, [TABI](https://github.com/stemangiola/TABI) supervised by: [Dr. Stefano Mangiola](https://github.com/stemangiola) & [Prof. Tony Papenfuss](https://papenfusslab.org/bio_papenfuss) (December 2019 - March 2021)